PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OB07G14580.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bHLH
Protein Properties Length: 242aa    MW: 25785.8 Da    PI: 9.7663
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OB07G14580.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.71.6e-11124171455
                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   +h+ +Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+sLq
  OB07G14580.1 124 SHSLAERARREKISERMKVLQDLVPGC----NKVIGKASVLDEIINYIQSLQ 171
                   8*************************9....677*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000836.06E-12118175No hitNo description
SuperFamilySSF474592.09E-18118188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.406120170IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.9E-19120188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-9124171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.2E-11126176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0048446Biological Processpetal morphogenesis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MGKGGGGGRG XXXASAVVTG QGSGIRVGPG GGSGRRRPRR DAAAEDDSSK IVSTSGGGGH  60
DSVAQEAKRL KPMKYSDNND NLSTEAGTGS GNSSKAAGKN ATPPELPKQD YIHVRARRGQ  120
ATDSHSLAER ARREKISERM KVLQDLVPGC NKVIGKASVL DEIINYIQSL QHQVEFLSMK  180
LEAVNSHMNN GIVDFPSKDF GSQTYNTAAG LTFDPQTPRE YAQGSTSEWL HMQIGNAYER  240
VT
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00207DAPTransfer from AT1G59640Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2426450.0AK242645.1 Oryza sativa Japonica Group cDNA, clone: J090025G02, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658364.11e-170PREDICTED: transcription factor bHLH79-like
SwissprotQ9LV173e-53BH079_ARATH; Transcription factor bHLH79
SwissprotQ0JXE79e-53BPE_ARATH; Transcription factor BPE
TrEMBLJ3MJ761e-177J3MJ76_ORYBR; Uncharacterized protein
STRINGOB07G14580.11e-176(Oryza brachyantha)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30653577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.15e-70BIG PETAL P